STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019155BAF chromatin remodeling complex subunit BCL7A. (210 aa)    
Predicted Functional Partners:
ENSGMOP00000009215
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b.
   
 
 0.841
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
   
 
 0.841
ENSGMOP00000019055
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.
   
 
 0.833
ENSGMOP00000003174
SS18 subunit of BAF chromatin remodeling complex.
    
 
 0.802
ENSGMOP00000018080
annotation not available
   
 
 0.760
ENSGMOP00000006538
Bromodomain containing 7.
   
 
 0.744
ENSGMOP00000002183
annotation not available
    
 
 0.714
SMARCE1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
    
 
 0.714
ENSGMOP00000017190
AT rich interactive domain 2 (ARID, RFX-like).
    
 
 0.713
ENSGMOP00000006610
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b.
   
 
 0.695
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.