STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019165Trafficking protein particle complex 13. (418 aa)    
Predicted Functional Partners:
ENSGMOP00000000864
Trafficking protein particle complex 12.
    
 0.994
trappc1
Trafficking protein particle complex 1.
    
 0.993
ENSGMOP00000015196
Trafficking protein particle complex 5.
    
 0.988
ENSGMOP00000001524
Trafficking protein particle complex 2-like.
    
 0.987
ENSGMOP00000012301
Trafficking protein particle complex 2.
   
 0.985
LOC115561333
Trafficking protein particle complex subunit 6b-like.
   
 0.985
ENSGMOP00000014247
Trafficking protein particle complex 11.
   
 0.984
ENSGMOP00000003371
Trafficking protein particle complex 8.
   
 0.978
trappc3
Trafficking protein particle complex 3.
    
 0.976
ENSGMOP00000002499
Trafficking protein particle complex 10.
     
 0.973
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.