STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019177annotation not available (830 aa)    
Predicted Functional Partners:
ENSGMOP00000000796
annotation not available
    
  0.521
ENSGMOP00000002985
Integrin, beta 1a.
    
  0.521
ENSGMOP00000013233
annotation not available
    
  0.521
ENSGMOP00000014796
annotation not available
    
  0.521
ENSGMOP00000017523
Integrin, beta 1b.
    
  0.521
ENSGMOP00000019952
annotation not available
    
  0.521
ENSGMOP00000000189
Integrin beta 3a.
    
  0.471
ENSGMOP00000002944
Integrin, beta 5.
    
  0.471
ENSGMOP00000011665
annotation not available
    
  0.471
ENSGMOP00000000540
Integrin, beta 6.
    
  0.465
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.