STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019185Topoisomerase I binding, arginine/serine-rich a. (434 aa)    
Predicted Functional Partners:
ENSGMOP00000006264
annotation not available
    
 0.821
LOC115538019
SUMO-conjugating enzyme UBC9-like.
    
 0.814
ube2i
Ubiquitin conjugating enzyme E2 I.
    
 0.814
ENSGMOP00000008291
Tumor protein p53.
    
 
 0.799
ENSGMOP00000003163
Potassium channel tetramerization domain containing 2.
    
 0.782
ENSGMOP00000004173
annotation not available
    
 0.731
sumo2
Small ubiquitin like modifier 2.
    
 0.731
SUMO3
Small ubiquitin-related modifier 3.
    
 0.731
ENSGMOP00000020731
Small ubiquitin like modifier 3b.
    
 0.731
ENSGMOP00000000319
Nuclear factor of activated T cells 2 interacting protein.
    
 0.723
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.