STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019189annotation not available (351 aa)    
Predicted Functional Partners:
ENSGMOP00000011937
Zinc finger CCCH-type containing 14.
    
 
 0.853
ENSGMOP00000001190
DAZ associated protein 1.
  
  
 
0.833
ENSGMOP00000005470
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
  
 
 0.790
ENSGMOP00000008126
annotation not available
  
  
 
0.727
HNRNPA0
Heterogeneous nuclear ribonucleoprotein A0.
  
 
0.665
HNRNPA3
Heterogeneous nuclear ribonucleoprotein A3.
  
 
0.662
ENSGMOP00000019306
Heterogeneous nuclear ribonucleoprotein A1a.
  
 
0.660
ENSGMOP00000021842
annotation not available
  
 
0.652
ENSGMOP00000000350
Transportin 1.
   
 
 0.637
ENSGMOP00000009650
Transportin 2 (importin 3, karyopherin beta 2b).
   
 
 0.637
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.