STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019202P53-induced death domain protein 1. (828 aa)    
Predicted Functional Partners:
ENSGMOP00000011865
Caspase 2, apoptosis-related cysteine peptidase.
    
 0.969
CASK
Calcium/calmodulin dependent serine protein kinase.
    
  0.916
ENSGMOP00000017627
annotation not available
    
  0.916
ENSGMOP00000010713
NME/NM23 family member 8.
  
 0.901
ENSGMOP00000000537
Eukaryotic translation elongation factor 1 gamma.
    
 0.894
ENSGMOP00000013324
Vav 3 guanine nucleotide exchange factor b.
    
 0.891
ENSGMOP00000017791
Netrin g1a.
    
 0.891
ENSGMOP00000008547
methionyl-tRNA synthetase 1.
   
 0.889
ENSGMOP00000011393
Tonsoku-like, DNA repair protein.
   
 0.877
ENSGMOP00000013082
Receptor-interacting serine-threonine kinase 4.
  
 0.848
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.