STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019207Homeobox C10a. (329 aa)    
Predicted Functional Partners:
ENSGMOP00000004128
annotation not available
   
  
0.629
ENSGMOP00000004528
Homeobox D9a.
   
  
0.629
ENSGMOP00000019199
Homeobox C11a.
   
  
0.532
ENSGMOP00000001256
annotation not available
  
 
0.516
ENSGMOP00000004492
Homeobox D3a.
   
 
0.512
ENSGMOP00000012962
annotation not available
  
 
0.503
hoxd4
Homeobox D4.
   
 
0.477
ENSGMOP00000006833
annotation not available
    
 
 0.459
ENSGMOP00000007733
pre-B-cell leukemia homeobox 2.
    
 
 0.459
ENSGMOP00000008163
pre-B-cell leukemia homeobox 1b.
    
 
 0.459
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.