STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019230CCAAT enhancer binding protein zeta. (966 aa)    
Predicted Functional Partners:
ENSGMOP00000000681
NOC2-like nucleolar associated transcriptional repressor.
   
 
 0.998
ENSGMOP00000004509
Programmed cell death 11.
   
 
 0.997
ENSGMOP00000007561
RNA binding motif protein 28.
   
 
 0.993
ENSGMOP00000016556
DEAD (Asp-Glu-Ala-Asp) box helicase 56.
   
 
 0.992
ENSGMOP00000002662
Ribosome production factor 2 homolog.
   
 
 0.988
ENSGMOP00000017264
GTP binding protein 4.
   
 
 0.987
ENSGMOP00000003643
Peter pan homolog.
   
 
 0.985
ENSGMOP00000013914
Pescadillo.
   
 
 0.985
ENSGMOP00000007572
DEAD (Asp-Glu-Ala-Asp) box polypeptide 18.
   
 
 0.984
ENSGMOP00000012493
RNA binding motif protein 34.
   
 
 0.984
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.