STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019263annotation not available (66 aa)    
Predicted Functional Partners:
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.831
ENSGMOP00000020560
Serine/arginine repetitive matrix 1.
   
 0.826
ENSGMOP00000001666
Serine and arginine rich splicing factor 2a.
   
 0.799
ENSGMOP00000008177
Serine and arginine rich splicing factor 2b.
   
 0.799
ENSGMOP00000017135
Zinc finger, RAN-binding domain containing 2.
   
 0.793
ENSGMOP00000013002
Si:dkey-221l4.10.
   
 0.790
ENSGMOP00000001569
RNA binding protein S1, serine-rich domain.
   
 0.780
ENSGMOP00000017428
Polymerase (RNA) II (DNA directed) polypeptide B.
   
 
 0.750
ENSGMOP00000000956
annotation not available
   
 0.747
ENSGMOP00000002142
Serine and arginine rich splicing factor 7a.
   
 0.747
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.