STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019282Chromobox homolog 5 (HP1 alpha homolog, Drosophila). (153 aa)    
Predicted Functional Partners:
ENSGMOP00000009644
Suppressor of variegation 3-9 homolog 1b.
   
 0.917
ENSGMOP00000006394
Euchromatic histone-lysine N-methyltransferase 2.
    
 0.820
ENSGMOP00000008468
Euchromatic histone-lysine N-methyltransferase 1a.
    
 0.820
ENSGMOP00000014781
Euchromatic histone-lysine N-methyltransferase 1b.
    
 0.820
ENSGMOP00000003257
Si:ch211-195d17.2.
   
 0.811
ENSGMOP00000009925
Mbt domain containing 1.
    
 0.782
ENSGMOP00000014365
L3MBTL histone methyl-lysine binding protein 2.
    
 0.782
ENSGMOP00000017348
annotation not available
    
 0.782
ENSGMOP00000013561
Polycomb group ring finger 6.
    
 0.762
ENSGMOP00000017240
Polycomb group ring finger 1.
    
 0.762
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.