STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atp5mgATP synthase membrane subunit g. (103 aa)    
Predicted Functional Partners:
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
   
 0.999
atp5f1d
ATP synthase F1 subunit delta.
   
 0.999
ENSGMOP00000015610
ATP synthase peripheral stalk subunit d.
   
 0.999
ENSGMOP00000017454
ATP synthase peripheral stalk subunit OSCP.
   
 0.999
atp5pf
ATP synthase peripheral stalk subunit F6.
   
 0.998
atp5f1c
ATP synthase F1 subunit gamma.
   
 0.998
atp5f1a
ATP synthase F1 subunit alpha.
   
 0.998
ENSGMOP00000012400
ATP synthase peripheral stalk subunit d.
   
 0.997
ENSGMOP00000019539
annotation not available
   
 0.996
ENSGMOP00000002488
ATP synthase membrane subunit f.
   
 0.990
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.