STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019410Activating transcription factor 6. (490 aa)    
Predicted Functional Partners:
ENSGMOP00000002587
Heat shock protein 5.
    
 0.898
ENSGMOP00000008550
annotation not available
   
 0.893
ENSGMOP00000019414
Activating transcription factor 4a.
     
 0.883
ENSGMOP00000007141
Wolfram syndrome 1a (wolframin).
    
 0.864
ENSGMOP00000021097
annotation not available
    
 0.864
ENSGMOP00000011179
cAMP responsive element binding protein 3-like 2.
    
 0.849
ENSGMOP00000008190
cAMP responsive element binding protein 3-like 3 like.
    
 0.831
ENSGMOP00000012556
cAMP responsive element binding protein 3-like 3a.
    
 0.830
ENSGMOP00000000529
X-box binding protein 1.
    
 0.827
ENSGMOP00000001534
Calcium/calmodulin-dependent protein kinase IV.
   
 
 0.786
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.