STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019418Ankyrin repeat and BTB (POZ) domain containing 1. (473 aa)    
Predicted Functional Partners:
ENSGMOP00000016009
valyl-tRNA synthetase 1.
  
 
 0.898
ENSGMOP00000015042
Eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein).
    
   0.810
ENSGMOP00000008547
methionyl-tRNA synthetase 1.
  
 0.674
ENSGMOP00000016028
cysteinyl-tRNA synthetase 1.
   
   0.661
ENSGMOP00000000253
annotation not available
   
 0.652
ENSGMOP00000015003
enoyl-CoA delta isomerase 2.
    
 0.648
ENSGMOP00000006085
CDK2 associated cullin domain 1.
   
 0.641
ENSGMOP00000006374
annotation not available
   
 0.641
CUL3
Cullin-3-like.
   
 0.641
ENSGMOP00000018480
Cullin 3b.
   
 0.641
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.