STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019437Kruppel-like factor 17. (420 aa)    
Predicted Functional Partners:
ENSGMOP00000005330
annotation not available
    
  0.871
ENSGMOP00000005370
annotation not available
    
  0.871
ENSGMOP00000005053
POU domain, class 5, transcription factor 3.
    
 0.750
ENSGMOP00000006456
MYC proto-oncogene, bHLH transcription factor a.
   
 0.663
ENSGMOP00000010713
NME/NM23 family member 8.
    
 0.606
sox2
SRY-box transcription factor 2.
    
 0.597
LOC115552886
Transcription factor Sox-3.
    
 0.597
ENSGMOP00000005311
annotation not available
    
  0.592
ENSGMOP00000012733
Ribosomal protein S27a.
    
  0.591
ENSGMOP00000020573
Forkhead box A3.
    
 0.590
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.