STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019624Coiled-coil domain containing 93. (608 aa)    
Predicted Functional Partners:
ENSGMOP00000016033
Coiled-coil domain containing 22.
    
 
 0.960
COMMD10
COMM domain containing 10.
    
 
 0.928
ENSGMOP00000015767
Copper metabolism (Murr1) domain containing 1.
   
 
 0.910
ENSGMOP00000021033
COMM domain containing 6.
   
 
 0.897
ENSGMOP00000009258
VPS26 endosomal protein sorting factor C.
    
 
 0.895
ENSGMOP00000006289
COMM domain containing 5.
    
 
 0.894
commd2
COMM domain containing 2.
    
 
 0.890
ENSGMOP00000015331
COMM domain containing 3.
    
 
 0.887
ENSGMOP00000010722
VPS29 retromer complex component.
    
 
 0.884
ENSGMOP00000001087
COMM domain containing 8.
    
 
 0.874
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.