STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019661annotation not available (161 aa)    
Predicted Functional Partners:
ENSGMOP00000020338
RAB, member of RAS oncogene family-like 2.
   
    0.773
isca1
Iron-sulfur cluster assembly 1.
      
 0.555
ENSGMOP00000018820
Zinc finger protein 644a.
      
 0.524
ENSGMOP00000006943
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2.
      
 0.489
ENSGMOP00000008130
Ring finger protein 220b.
      
 0.459
ENSGMOP00000019471
Ring finger protein 220a.
      
 0.459
ENSGMOP00000003775
annotation not available
   
    0.420
ENSGMOP00000004420
RAB11a, member RAS oncogene family.
   
    0.420
RAB25
RAB25, member RAS oncogene family.
   
    0.420
ENSGMOP00000006855
RAB11a, member RAS oncogene family, like.
   
    0.420
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.