STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019692Sad1 and UNC84 domain containing 1. (928 aa)    
Predicted Functional Partners:
ENSGMOP00000016299
Spectrin repeat containing, nuclear envelope 1a.
    
 0.803
ENSGMOP00000016719
annotation not available
    
 0.803
ENSGMOP00000020283
annotation not available
    
 0.803
ENSGMOP00000020964
Spectrin repeat containing, nuclear envelope 1b.
    
 0.803
ENSGMOP00000011620
Lamin B2.
    
 0.784
ENSGMOP00000014570
Lamin B1.
    
 0.768
LMNA
Lamin A/C.
    
 0.747
LMNA-2
Lamin A/C.
    
 0.747
ENSGMOP00000018067
annotation not available
    
 0.677
LOC115546069
Histone H2A.V.
    
 
 0.656
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.