STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019748SBDS ribosome maturation factor. (252 aa)    
Predicted Functional Partners:
EFL1
Elongation factor like GTPase 1.
  
 
 0.981
RPL37A
Ribosomal protein L37a.
  
   0.961
ENSGMOP00000008109
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 
 0.950
ENSGMOP00000012827
Ribosomal protein L11.
  
 
 0.931
EEF2
Eukaryotic translation elongation factor 2.
  
 
 0.912
ENSGMOP00000001489
MRT4 homolog, ribosome maturation factor.
   
 
 0.911
ENSGMOP00000003830
Ribosomal protein L24.
  
 
 0.895
ENSGMOP00000010883
G elongation factor, mitochondrial 1.
  
 
 0.890
eftud2
Elongation factor Tu GTP binding domain containing 2.
  
 
 0.890
ENSGMOP00000018936
Ribosomal protein, large, P0.
   
 
 0.884
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.