STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019787Glutamic-oxaloacetic transaminase 1, soluble. (409 aa)    
Predicted Functional Partners:
ENSGMOP00000003241
Glutamic-oxaloacetic transaminase 2b, mitochondrial.
  
0.955
ENSGMOP00000007081
annotation not available
   
 0.897
ENSGMOP00000013323
annotation not available
   
 0.897
ENSGMOP00000012517
Fumarate hydratase.
   
 0.895
ENSGMOP00000003626
Malate dehydrogenase 1Aa, NAD (soluble).
   
 0.894
ENSGMOP00000014950
annotation not available
   
 0.894
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
  
 0.887
cs
Citrate synthase.
   
 
 0.886
ENSGMOP00000010251
Succinate dehydrogenase complex, subunit A, flavoprotein (Fp).
  
 0.886
ENSGMOP00000014837
Aldehyde dehydrogenase 4 family, member A1.
  
 0.881
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.