STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019803Transforming growth factor, beta 1a. (377 aa)    
Predicted Functional Partners:
TGFBR2
Transforming growth factor beta receptor 2.
    
 0.991
ENSGMOP00000011470
annotation not available
    
 0.991
ENSGMOP00000016014
Si:dkey-101k6.5.
    
 0.982
ENSGMOP00000019029
Integrin, beta 8.
   
 0.968
ENSGMOP00000000540
Integrin, beta 6.
   
 0.966
ENSGMOP00000013569
Decorin.
    
 0.960
ENSGMOP00000000603
Transforming growth factor, beta receptor 1 b.
    
 0.953
ENSGMOP00000009451
Transforming growth factor, beta 5.
  
 
0.920
ENSGMOP00000018664
Transforming growth factor, beta 2.
    
0.917
ACVR1B
Activin A receptor type 1B.
    
 0.916
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.