STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019806SLIT-ROBO Rho GTPase activating protein 1a. (1002 aa)    
Predicted Functional Partners:
ENSGMOP00000014534
Intersectin 2b.
   
0.873
ENSGMOP00000019906
Intersectin 2a.
   
0.873
ENSGMOP00000018121
Intersectin 1 (SH3 domain protein).
   
 0.777
ENSGMOP00000000592
annotation not available
   
 0.732
ENSGMOP00000021166
WASP actin nucleation promoting factor a.
   
 0.732
LOC115540915
Cell division control protein 42 homolog.
    
 0.686
CDC42
Cell division cycle 42.
    
 0.686
ENSGMOP00000001930
annotation not available
    
 0.674
ENSGMOP00000013918
Growth arrest-specific 7a.
    
 0.674
LOC115553989
Cell division control protein 42 homolog.
    
 0.656
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (20%) [HD]