STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppil1Peptidylprolyl isomerase like 1. (166 aa)    
Predicted Functional Partners:
ENSGMOP00000000886
Cell division cycle 40 homolog (S. cerevisiae).
    
 0.997
ENSGMOP00000001802
SNW domain containing 1.
    
 0.997
ENSGMOP00000020585
SYF2 pre-mRNA-splicing factor.
    
 0.997
ENSGMOP00000000404
CDC5 cell division cycle 5-like (S. pombe).
   
 
 0.991
eftud2
Elongation factor Tu GTP binding domain containing 2.
  
 0.989
ppwd1
Peptidylprolyl isomerase domain and WD repeat containing 1.
  
0.984
ENSGMOP00000020560
Serine/arginine repetitive matrix 1.
    
 0.982
ENSGMOP00000009702
CWC22 spliceosome associated protein homolog.
   
 0.980
ENSGMOP00000010523
Aquarius intron-binding spliceosomal factor.
    
 0.980
prpf19
pre-mRNA processing factor 19.
    
 0.979
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.