STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019887Teashirt zinc finger homeobox 3a. (1037 aa)    
Predicted Functional Partners:
ENSGMOP00000010603
Meis homeobox 2a.
   
 0.939
ENSGMOP00000002984
Yes-associated protein 1.
     
 0.858
ENSGMOP00000000634
annotation not available
   
 0.562
ENSGMOP00000002921
Mohawk homeobox a.
   
 0.562
ENSGMOP00000003388
Iroquois homeobox 1b.
   
 0.562
ENSGMOP00000004300
Iroquois homeobox 7.
   
 0.562
ENSGMOP00000004386
annotation not available
   
 0.562
ENSGMOP00000004413
Iroquois homeobox 5a.
   
 0.562
ENSGMOP00000006362
Iroquois homeobox 3a.
   
 0.562
ENSGMOP00000007088
Iroquois homeobox 1a.
   
 0.562
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.