STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019900Makorin, ring finger protein, 2. (402 aa)    
Predicted Functional Partners:
hagh
Hydroxyacylglutathione hydrolase.
 
 
  
 0.823
ENSGMOP00000007861
Thyroid hormone receptor interactor 12.
     
 0.775
ENSGMOP00000009381
Cleavage and polyadenylation specific factor 2.
   
 
  0.763
ENSGMOP00000012733
Ribosomal protein S27a.
    
  0.666
ENSGMOP00000013483
Ferrochelatase.
   
    0.596
ENSGMOP00000010811
Ubiquitin-like modifier activating enzyme 5.
    
  0.578
ENSGMOP00000011166
ATG7 autophagy related 7 homolog (S. cerevisiae).
    
  0.578
ENSGMOP00000006005
annotation not available
   
  0.552
ENSGMOP00000007083
Zinc finger, AN1-type domain 4.
   
  0.552
ENSGMOP00000009338
annotation not available
   
  0.552
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.