STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019980annotation not available (151 aa)    
Predicted Functional Partners:
ENSGMOP00000007583
Collectin sub-family member 12.
  
 
  0.603
ENSGMOP00000006973
Collagen, type XXVIII, alpha 1b.
  
 
  0.601
ENSGMOP00000018245
annotation not available
  
 
  0.598
ENSGMOP00000011583
annotation not available
    
  0.576
COLEC12
Collectin subfamily member 12.
  
 
  0.571
ENSGMOP00000015146
annotation not available
  
     0.533
ENSGMOP00000010330
Otolin 1b.
  
     0.532
ENSGMOP00000019696
annotation not available
  
     0.532
ENSGMOP00000000371
annotation not available
   
  0.531
ENSGMOP00000001767
annotation not available
  
     0.531
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.