STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019984SEC31 homolog A, COPII coat complex component. (1036 aa)    
Predicted Functional Partners:
ENSGMOP00000017796
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.992
ENSGMOP00000002581
SEC23 homolog B, coat complex II component.
   
 0.986
ENSGMOP00000000868
Sec23 homolog A, coat complex II component.
   
 0.985
ENSGMOP00000009231
SEC24 homolog B, COPII coat complex component.
   
 0.977
ENSGMOP00000008581
SEC24 homolog A, COPII coat complex component.
   
 0.974
ENSGMOP00000008583
annotation not available
   
 0.974
ENSGMOP00000018821
SEC24 homolog C, COPII coat complex component.
   
 0.962
ENSGMOP00000008234
SEC24 homolog D, COPII coat complex component.
   
 0.957
LOC115531483
GTP-binding protein SAR1b-like.
   
 0.948
sar1b
Secretion associated Ras related GTPase 1B.
   
 0.948
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.