STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020003UBA domain containing 2. (338 aa)    
Predicted Functional Partners:
faf2
Fas associated factor family member 2.
    
 
 0.973
ENSGMOP00000012331
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.952
ENSGMOP00000001019
Fas (TNFRSF6) associated factor 1.
    
 
 0.934
ENSGMOP00000001118
NPL4 homolog, ubiquitin recognition factor.
    
 
 0.836
ENSGMOP00000002920
annotation not available
    
 
 0.836
ENSGMOP00000006186
Synovial apoptosis inhibitor 1, synoviolin.
    
 
 0.743
ENSGMOP00000018248
Autocrine motility factor receptor a.
    
 
 0.743
ENSGMOP00000016194
ER membrane protein complex subunit 1.
    
 
 0.689
ENSGMOP00000008358
ER membrane protein complex subunit 3.
    
 
 0.656
emc2
ER membrane protein complex subunit 2.
    
 
 0.631
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.