STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020009Lin-54 DREAM MuvB core complex component. (634 aa)    
Predicted Functional Partners:
ENSGMOP00000016082
Lin-9 DREAM MuvB core complex component.
   
 0.984
ENSGMOP00000000083
Lin-37 DREAM MuvB core complex component.
    
 0.983
ENSGMOP00000017013
Lin-52 DREAM MuvB core complex component.
    
 0.981
ENSGMOP00000005214
Retinoblastoma binding protein 4, like.
   
 0.940
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.940
ENSGMOP00000012523
annotation not available
   
 0.940
ENSGMOP00000006399
annotation not available
    
 0.926
ENSGMOP00000015410
V-myb avian myeloblastosis viral oncogene homolog-like 2b.
    
 0.926
ENSGMOP00000020455
annotation not available
    
 0.926
ENSGMOP00000017712
Retinoblastoma-like 1 (p107).
   
 0.894
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.