STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020010Mitochondrial ribosomal protein L46. (251 aa)    
Predicted Functional Partners:
ENSGMOP00000000531
Mitochondrial ribosomal protein L27.
   
 
 0.998
ENSGMOP00000008507
Mitochondrial ribosomal protein S15.
   
 
 0.998
ENSGMOP00000009150
Mitochondrial ribosomal protein L16.
   
 0.998
ENSGMOP00000011725
annotation not available
   
 
 0.998
ENSGMOP00000021643
annotation not available
   
 
 0.998
ENSGMOP00000006253
Mitochondrial ribosomal protein L15.
   
 
 0.997
ENSGMOP00000014634
Mitochondrial ribosomal protein L22.
   
   0.997
ENSGMOP00000019739
Mitochondrial ribosomal protein L2.
   
 
 0.997
ENSGMOP00000014545
Mitochondrial ribosomal protein L17.
   
   0.996
ENSGMOP00000018285
Mitochondrial ribosomal protein L3.
   
 
 0.996
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.