STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020100Methyltransferase like 25. (432 aa)    
Predicted Functional Partners:
ENSGMOP00000006938
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
 0.959
CASTOR1
Cytosolic arginine sensor for mTORC1 subunit 1.
    
 0.945
ENSGMOP00000018095
WD repeat domain 24.
    
 0.935
ENSGMOP00000011384
WD repeat domain 59.
    
 0.923
ENSGMOP00000014485
SEH1-like (S. cerevisiae).
     
 0.881
ENSGMOP00000017796
SEC13 homolog, nuclear pore and COPII coat complex component.
     
 0.856
ENSGMOP00000020642
Zinc finger, C2HC-type containing 1A.
    
 
 0.719
ENSGMOP00000002423
Integrin alpha FG-GAP repeat containing 2.
   
 
 0.626
ENSGMOP00000001839
Chromosome 12 open reading frame 66.
    
 0.619
ENSGMOP00000004457
NPR3-like, GATOR1 complex subunit.
   
 
 0.591
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.