STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB28RAB28, member RAS oncogene family. (222 aa)    
Predicted Functional Partners:
ENSGMOP00000006058
annotation not available
    
 0.724
ENSGMOP00000016057
RAB3A interacting protein (rabin3).
    
 0.715
ENSGMOP00000019463
RAB3A interacting protein (rabin3)-like 1.
    
 0.715
ENSGMOP00000001629
Rab geranylgeranyltransferase subunit beta.
    
 0.686
ENSGMOP00000004357
CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.
    
 0.661
ENSGMOP00000004012
Exocyst complex component 4.
    
 0.654
ENSGMOP00000020156
Exocyst complex component 1.
   
 0.647
ENSGMOP00000002675
GDP dissociation inhibitor 2.
   
 0.644
LOC115557592
Rab GDP dissociation inhibitor alpha.
   
 0.644
ENSGMOP00000008751
Zgc:112334.
   
 0.644
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.