STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020112Coiled-coil domain containing 59. (205 aa)    
Predicted Functional Partners:
ENSGMOP00000003625
LLP homolog, long-term synaptic facilitation factor.
   
    0.859
ENSGMOP00000005715
Ribonuclease P/MRP 30 subunit.
   
 
  0.798
ENSGMOP00000001103
POP5 homolog, ribonuclease P/MRP subunit.
   
 
  0.780
ENSGMOP00000006581
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
  0.688
ENSGMOP00000009336
Coiled-coil domain containing 58.
   
    0.603
denr
Density regulated re-initiation and release factor.
   
    0.601
ENSGMOP00000002613
annotation not available
   
 
  0.600
ENSGMOP00000004147
Ribonuclease P and MRP subunit p25, b.
   
 
  0.600
ENSGMOP00000010453
Ribonuclease P/MRP 25 subunit-like.
   
 
  0.600
ENSGMOP00000010531
RWD domain containing 1.
   
    0.532
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.