STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020152Tetraspanin 11. (260 aa)    
Predicted Functional Partners:
ENSGMOP00000005783
Integrin, beta 4.
    
 0.784
ENSGMOP00000001731
annotation not available
    
 0.706
ENSGMOP00000002352
Integrin, alpha 6a.
    
 0.706
ENSGMOP00000020269
annotation not available
    
 0.706
ENSGMOP00000002677
Macrophage stimulating 1 receptor b.
    
  0.665
ENSGMOP00000009026
MET proto-oncogene, receptor tyrosine kinase.
    
  0.665
ENSGMOP00000017608
Macrophage stimulating 1 receptor a.
    
  0.665
ENSGMOP00000006898
Platelet endothelial aggregation receptor 1.
     
 0.610
ENSGMOP00000016809
GRAM domain containing 1c.
    
   0.588
ENSGMOP00000001767
annotation not available
     
 0.574
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.