STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020158Solute carrier family 19 member 2. (369 aa)    
Predicted Functional Partners:
ENSGMOP00000008716
Pseudouridine synthase 1.
      
 0.578
ENSGMOP00000007974
tRNA nucleotidyl transferase, CCA-adding, 1.
      
 0.457
ENSGMOP00000017242
Aminolevulinate, delta-, synthase 2.
      
 0.456
ENSGMOP00000001120
tyrosyl-tRNA synthetase 2, mitochondrial.
      
 0.449
ENSGMOP00000006291
ATP-binding cassette, sub-family B (MDR/TAP), member 7.
      
 0.436
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.