STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020180annotation not available (59 aa)    
Predicted Functional Partners:
ENSGMOP00000009381
Cleavage and polyadenylation specific factor 2.
   
 0.964
ENSGMOP00000000852
Cleavage and polyadenylation specific factor 1.
    
 0.963
ENSGMOP00000002474
Cleavage and polyadenylation specific factor 4.
    
 0.963
ENSGMOP00000002524
Symplekin.
   
 0.963
WDR33
WD repeat domain 33.
   
 0.961
ENSGMOP00000013142
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
 0.954
ENSGMOP00000005470
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
    
 0.953
ENSGMOP00000005221
FIP1 like 1b (S. cerevisiae).
   
 0.943
ENSGMOP00000012918
annotation not available
   
 0.943
LOC115534519
Cleavage and polyadenylation specificity factor subunit 3-like.
   
 0.942
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.