STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAF8SR-related CTD associated factor 8. (1097 aa)    
Predicted Functional Partners:
ENSGMOP00000008275
Polymerase (RNA) II (DNA directed) polypeptide A.
   
 
 0.807
ENSGMOP00000018748
annotation not available
   
 
 0.807
ENSGMOP00000020046
Nuclear cap binding protein subunit 2.
   
 
 0.729
ENSGMOP00000005654
RNA (guanine-7-) methyltransferase.
   
 
 0.709
ENSGMOP00000006518
Exosome component 10.
   
 
 0.695
NCBP1
Nuclear cap binding protein subunit 1.
   
 
 0.690
ENSGMOP00000017428
Polymerase (RNA) II (DNA directed) polypeptide B.
   
 
 0.666
polr2c
RNA polymerase II subunit C.
   
 
 0.658
TENT4A
Terminal nucleotidyltransferase 4A.
    
 
 0.640
ENSGMOP00000006608
Terminal nucleotidyltransferase 4B.
    
 
 0.640
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.