STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020226Myotubularin related protein 1a. (578 aa)    
Predicted Functional Partners:
FIG4
FIG4 phosphoinositide 5-phosphatase.
     
 0.894
ENSGMOP00000019022
Phosphatidylinositol 3-kinase, catalytic subunit type 3.
     
 0.894
ENSGMOP00000001889
CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase).
     
 0.872
ENSGMOP00000006000
Phosphoinositide kinase, FYVE finger containing.
     
 0.867
ENSGMOP00000019874
Myotubularin related protein 14.
     
 0.862
ENSGMOP00000020363
annotation not available
   
 
 0.860
ENSGMOP00000014572
SAC1 like phosphatidylinositide phosphatase b.
   
 
 0.859
ENSGMOP00000017317
Inositol polyphosphate-4-phosphatase type II B.
   
 
 0.856
ENSGMOP00000008543
annotation not available
   
 
 0.855
ENSGMOP00000019200
Phospholipase C, delta 3a.
     
 0.852
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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