STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020264Si:dkey-150i13.2. (206 aa)    
Predicted Functional Partners:
ENSGMOP00000008111
Carnitine palmitoyltransferase 2.
   
  
 0.740
ENSGMOP00000008207
annotation not available
    
 0.739
ACSF2
acyl-CoA synthetase family member 2.
    
 0.739
LOC115558856
Gamma-secretase subunit Aph-1b.
 
    
 0.727
ENSGMOP00000010990
annotation not available
 
      0.724
ENSGMOP00000000032
Phosphoglucomutase 2.
    
 0.708
ENSGMOP00000019448
Phosphoglucomutase 2-like 1.
    
 0.708
ENSGMOP00000017589
glutaminyl-tRNA amidotransferase subunit QRSL1.
     
 0.692
ENSGMOP00000007881
Phosphoglucomutase 3.
    
 0.670
ENSGMOP00000013935
Lipase, hormone-sensitive a.
   
 0.662
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.