STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020268annotation not available (166 aa)    
Predicted Functional Partners:
ENSGMOP00000000647
Kelch-like family member 17.
   
 0.521
ENSGMOP00000010078
Kelch-like family member 18.
   
 0.521
ENSGMOP00000011583
annotation not available
      
 0.520
ENSGMOP00000004511
Kelch-like ECH-associated protein 1a.
   
 0.517
ENSGMOP00000018449
Kelch-like ECH-associated protein 1b.
   
 0.517
ENSGMOP00000009349
Mitochondrial intermediate peptidase.
   
  
 0.497
ENSGMOP00000007405
ATP23 metallopeptidase and ATP synthase assembly factor homolog.
      
 0.489
ENSGMOP00000001744
Si:ch73-29c22.1.
   
 0.471
ENSGMOP00000015888
Kelch-like family member 20.
   
 0.471
ENSGMOP00000005678
X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound.
   
 
 0.460
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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