STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020291Period circadian clock 1b. (1215 aa)    
Predicted Functional Partners:
ENSGMOP00000002090
Timeless circadian clock.
   
 0.975
ENSGMOP00000007297
F-box and WD repeat domain containing 11a.
    
 0.918
ENSGMOP00000001134
Cryptochrome circadian regulator 1b.
   
 0.908
ENSGMOP00000002236
Casein kinase 1, delta b.
    
 0.908
ENSGMOP00000010715
annotation not available
    
 0.908
ENSGMOP00000013194
Neuronal PAS domain protein 2.
    
0.891
ENSGMOP00000018712
Cryptochrome circadian regulator 5.
   
 0.888
ENSGMOP00000005129
Clock circadian regulator b.
    
0.885
ENSGMOP00000003656
Basic helix-loop-helix family, member e41.
    
 0.881
ENSGMOP00000004308
Aryl hydrocarbon receptor nuclear translocator-like 2.
    
0.874
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.