STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020349Zinc finger protein 395a. (447 aa)    
Predicted Functional Partners:
ENSGMOP00000012718
FAU ubiquitin like and ribosomal protein S30 fusion a.
    
  0.906
ENSGMOP00000018668
Ubiquitin-conjugating enzyme E2 variant 1.
     
 0.846
ENSGMOP00000021004
annotation not available
     
 0.846
ENSGMOP00000015886
Si:ch73-22o12.1.
   
 0.843
rpl21
Ribosomal protein L21.
   
   0.814
ENSGMOP00000013739
annotation not available
    
 0.800
ENSGMOP00000011618
Phospholipase A2, group IVAb (cytosolic, calcium-dependent).
    
 0.788
ENSGMOP00000011958
BRISC and BRCA1 A complex member 1.
    
 0.782
ENSGMOP00000019258
annotation not available
    
 0.780
ENSGMOP00000020055
LYR motif containing 4.
    
 0.780
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.