STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020397valyl-tRNA synthetase 2, mitochondrial. (945 aa)    
Predicted Functional Partners:
ENSGMOP00000000537
Eukaryotic translation elongation factor 1 gamma.
 
 
 0.984
ENSGMOP00000003895
isoleucyl-tRNA synthetase 1.
  
0.961
ENSGMOP00000014615
leucyl-tRNA synthetase 1b.
   
 0.959
ENSGMOP00000017622
isoleucyl-tRNA synthetase 2, mitochondrial.
  
0.959
ENSGMOP00000000814
leucyl-tRNA synthetase 2, mitochondrial.
   
0.952
ENSGMOP00000006968
tyrosyl-tRNA synthetase 1.
  
 
 0.945
ENSGMOP00000008547
methionyl-tRNA synthetase 1.
  
 0.945
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.941
ENSGMOP00000020984
annotation not available
  
 
 0.941
ENSGMOP00000017390
aspartyl-tRNA synthetase 2, mitochondrial.
  
  
 0.927
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.