STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spata2Spermatogenesis associated 2. (561 aa)    
Predicted Functional Partners:
ENSGMOP00000001432
Cylindromatosis (turban tumor syndrome), like.
     
 0.856
cyld
CYLD lysine 63 deubiquitinase.
     
 0.856
ENSGMOP00000019187
Cylindromatosis (turban tumor syndrome), b.
     
 0.856
ENSGMOP00000004808
annotation not available
     
 0.854
ENSGMOP00000011689
Nuclear factor of activated T cells 4.
     
 0.677
LOC115550909
Synemin-like.
  
  
  0.570
ENSGMOP00000003335
Zinc fingers and homeoboxes 3.
  
     0.486
ENSGMOP00000004156
Zinc finger protein 217.
  
     0.483
ENSGMOP00000000332
Zinc finger protein 148.
  
     0.469
ENSGMOP00000010150
annotation not available
  
  
  0.464
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.