STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020443Peptidylprolyl isomerase E (cyclophilin E). (293 aa)    
Predicted Functional Partners:
ENSGMOP00000009877
XPA binding protein 2.
   
 0.999
prpf19
pre-mRNA processing factor 19.
    
 0.999
ENSGMOP00000008146
Crooked neck pre-mRNA splicing factor 1.
   
 0.996
ENSGMOP00000010523
Aquarius intron-binding spliceosomal factor.
    
 0.996
ENSGMOP00000001802
SNW domain containing 1.
   
 0.995
bud31
BUD31 homolog.
   
 0.995
ENSGMOP00000010899
RNA binding motif protein 22.
   
 0.994
ENSGMOP00000005985
ISY1 splicing factor homolog.
   
  0.993
ENSGMOP00000020585
SYF2 pre-mRNA-splicing factor.
    
 0.965
ENSGMOP00000018233
Proline rich mitotic checkpoint control factor.
   
 0.955
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.