STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020539Thymine DNA glycosylase, tandem duplicate 2. (413 aa)    
Predicted Functional Partners:
ENSGMOP00000006264
annotation not available
   
 0.963
ENSGMOP00000010326
Phosphoribosylglycinamide formyltransferase.
  
 
  0.841
ENSGMOP00000004173
annotation not available
   
 0.832
sumo2
Small ubiquitin like modifier 2.
   
 0.832
SUMO3
Small ubiquitin-related modifier 3.
   
 0.832
ENSGMOP00000020731
Small ubiquitin like modifier 3b.
   
 0.832
ENSGMOP00000008488
APEX nuclease (multifunctional DNA repair enzyme) 1.
  
 
 0.786
ENSGMOP00000021168
APEX nuclease (apurinic/apyrimidinic endonuclease) 2.
  
 
 0.780
ENSGMOP00000000319
Nuclear factor of activated T cells 2 interacting protein.
   
 0.779
ube2i
Ubiquitin conjugating enzyme E2 I.
   
 0.771
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.