STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020575RUNX family transcription factor 3. (395 aa)    
Predicted Functional Partners:
ENSGMOP00000013181
Myb-like, SWIRM and MPN domains 1.
    
  0.981
ENSGMOP00000005327
Core-binding factor subunit beta.
    
 0.959
ENSGMOP00000011814
V-fos FBJ murine osteosarcoma viral oncogene homolog Ab.
    
 0.845
ENSGMOP00000002083
T-box transcription factor 21.
   
 0.844
ENSGMOP00000020161
Spi-1 proto-oncogene b.
   
 0.835
ENSGMOP00000000185
MDS1 and EVI1 complex locus.
    
 0.829
ENSGMOP00000021011
CCAAT enhancer binding protein beta.
    
 0.815
ENSGMOP00000002984
Yes-associated protein 1.
    
 0.801
ENSGMOP00000006228
T-cell acute lymphocytic leukemia 1.
    
 0.795
ENSGMOP00000001560
CBFA2/RUNX1 partner transcriptional co-repressor 3.
    
 0.760
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.