STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020711Xeroderma pigmentosum, complementation group C. (825 aa)    
Predicted Functional Partners:
gtf2h1
General transcription factor IIH subunit 1.
    
 0.986
ENSGMOP00000006739
Centrin, EF-hand protein, 2.
    
 0.984
ENSGMOP00000019408
Excision repair cross-complementation group 3.
   
 0.980
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
   
 0.966
ENSGMOP00000009298
RAD23 homolog A, nucleotide excision repair protein b.
   
 0.966
ENSGMOP00000019372
RAD23 homolog A, nucleotide excision repair protein a.
   
 0.966
ENSGMOP00000018823
Damage-specific DNA binding protein 2.
   
 0.955
ENSGMOP00000004549
Excision repair cross-complementation group 2.
    
 0.954
ENSGMOP00000010444
annotation not available
    
 0.949
ENSGMOP00000018230
annotation not available
    
 0.949
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.