STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020715annotation not available (169 aa)    
Predicted Functional Partners:
ENSGMOP00000020720
annotation not available
 
     0.919
WDFY4
WDFY family member 4.
   
 
  0.841
ENSGMOP00000013029
UV radiation resistance associated gene.
    
 0.816
ENSGMOP00000001729
Vacuolar protein sorting 45 homolog.
     
 0.544
ENSGMOP00000006029
Sorting nexin 19a.
   
 0.517
ENSGMOP00000012944
Sorting nexin 15.
   
 0.509
ENSGMOP00000019022
Phosphatidylinositol 3-kinase, catalytic subunit type 3.
    
 
 0.477
ENSGMOP00000003205
Pleckstrin homology domain containing, family M (with RUN domain) member 1.
    
 
0.471
ENSGMOP00000004004
Differentially expressed in FDCP 8 homolog.
    
  0.471
ENSGMOP00000006160
Rubicon autophagy regulator.
    
  0.471
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.