STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020741FYVE, RhoGEF and PH domain containing 5a. (471 aa)    
Predicted Functional Partners:
ENSGMOP00000009272
Mitochondrial calcium uptake 2.
   
 0.639
ENSGMOP00000018589
Mitochondrial calcium uptake 1.
   
 0.639
smdt1
Single-pass membrane protein with aspartate rich tail 1.
     
 0.633
PHB2
Prohibitin 2.
    
  0.592
ENSGMOP00000001938
RAB4B, member RAS oncogene family.
    
 0.569
ENSGMOP00000013326
RAB4a, member RAS oncogene family.
    
 0.569
ENSGMOP00000018610
Mitochondrial calcium uniporter.
   
 
 0.554
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
   
 
 0.554
ENSGMOP00000015198
Prohibitin.
    
  0.547
ENSGMOP00000005133
Ras-related GTP binding A.
    
 
 0.496
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.