STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020748Galactosidase, beta 1-like. (607 aa)    
Predicted Functional Partners:
ENSGMOP00000001449
Galactosamine (N-acetyl)-6-sulfatase.
   
 0.914
ENSGMOP00000020377
Glucosidase, beta, acid.
  
 0.914
ENSGMOP00000012244
Galactosidase, alpha.
  
 
 0.904
ENSGMOP00000002424
Galactose mutarotase.
  
 
 0.889
ENSGMOP00000006246
Neuraminidase 1.
  
 0.885
ENSGMOP00000003315
Si:ch211-122f10.4.
   
 0.883
ENSGMOP00000009979
Cathepsin A.
   
 0.883
ENSGMOP00000003324
Hexosaminidase B (beta polypeptide).
  
 
 0.880
ENSGMOP00000008926
Hexosaminidase A (alpha polypeptide).
  
 
 0.880
ENSGMOP00000005104
UDP-glucose ceramide glucosyltransferase.
  
 
 0.870
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.